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Conditional Gene Knockdown Plasmid Vectors _ Cre-dependent shRNA Expression

RNA interference (RNAi) is a powerful strategy for gene inhibition or silence. short hairpin RNA (shRNA) is widely used in RNAi applications and it can be incorporated into the plasmid vector. shRNA consists of a sense sequence and its reverse complementary antisense sequence linked by a short loop sequence. shRNA can be constitutively and ubiquitously expressed under the control of pol II promoter (U6 or H1) or pol III promoter (e.g., CMV). However, there’s a limitation when scientists want to knock down a target gene in a time-dependent manner or in a tissue-specific manner. To overcome this limitation, a Cre-dependent genetic switch can be added to achieve time-specific or tissue-specific shRNA expression and target gene repression.

RGBiotech provides two types of Cre-dependent shRNA plasmid vectors. For more information, please contact us at admin@rgbiotech.com.

1) Cre-Switch-ON shRNA plasmid vectors

Cre-Switch-ON shRNA plasmid vectors are designed for conditional activation of shRNA expression. In the absence of Cre recombinase, a stop sequence exists upstream of shRNA expression cassette and blocks its expression. While in the presence of Cre recombinase, the stop sequence is excised and allow shRNA expression.

Figure 1. Schematic diagram of Cre-Switch-ON shRNA

2) Cre-Switch-OFF shRNA plasmid vectors

Cre-Switch-ON shRNA plasmid vectors are designed for conditional activation of shRNA expression. In the absence of Cre recombinase, a stop sequence exists upstream of shRNA expression cassette and blocks its expression. While in the presence of Cre recombinase, the stop sequence is excised and allow shRNA expression.

Figure 2. Schematic diagram of Cre-Switch-OFF shRNA

 

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